efetch failed

efetch installed via conda, this time failed in one of the VM i use. Trying to manually install LWP::protocol::https result in further errors, arriving to complain for lacking a C compiler…

Bash went to the rescue:

curl -s https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?id=LT906492.1\&db=nuccore\&rettype=fasta 
Advertisement

Leave a Reply

Please log in using one of these methods to post your comment:

WordPress.com Logo

You are commenting using your WordPress.com account. Log Out /  Change )

Twitter picture

You are commenting using your Twitter account. Log Out /  Change )

Facebook photo

You are commenting using your Facebook account. Log Out /  Change )

Connecting to %s